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Category LaTeX and Sweave (Jeromy Anglim)

Beamer presentations using pandoc, markdown, LaTeX, and a makefile

This post discusses the creation of beamer presentations using a combination of markdown, pandoc, and LaTeX. This workflow offers the potential to reduce typing and increase readability of beamer presentation source code. Source code for an example presentation is provided… Continue Reading →

Converting Sweave LaTeX to knitr LaTeX: A case study

The following post documents the steps I needed to take in order to convert a project using Sweave LaTeX into one using knitr LaTeX. Additional Resources It is fairly straightforward to convert a document from Sweave LaTeX to knitr LaTeX…. Continue Reading →

Video of Reproducible Research with R: Melbourne R Users 1st Dec 2010

As previously mentioned I gave a talk at Melbourne R Users Group titled “Reproducible Research and R Workflow”. It covered technologies including LaTeX, Sweave, R, make, Eclipse, and git. This post shares the video. I’d like to thank Pedro Olaya… Continue Reading →

R Workflow: Slides from a Talk at Melbourne R Users (1st Dec 2010)

I gave a presentation at Melbourne R Users on the topic of R Workflow. The presentation covered R code organisation, and useful R related tools including Eclipse, StatET, Git, make, Sweave and LaTeX. Also, the slides from the presentation provide… Continue Reading →

Sweave Tutorial 3: Console Input and Output – Multiple Choice Test Analysis

This post provides an example of using Sweave to perform an item analysis of a multiple choice test. It is designed as a tutorial for learning more about using Sweave in a mode where console input and output is displayed…. Continue Reading →

Sweave Tutorial 2: Batch Individual Personality Reports using R, Sweave, and LaTeX

This post documents an example of using Sweave to generate individualised personality reports based on responses to a personality test. Each report provides information on both the responses of the general sample and responses of the specific respondent. All source… Continue Reading →

Getting Started with Git, EGit, Eclipse, and GitHub: Version Control for R Projects

This post provides information on (a) installing Git using the Eclipse plugin Egit. (b) uploading repositories to GitHub, and (c) links to resources on Git, Git and LaTeX, and Git and R. The focus is on version control for people… Continue Reading →

Sweave Tutorial 1: Using Sweave, R, and Make to Generate a PDF of Multiple Choice Questions

In this post I present an example of using Sweave to prepare a PDF of formatted multiple choice questions. More broadly the example shows how to use Sweave to incorporate elements of a database into a formatted LaTeX document. It… Continue Reading →

makefiles for Sweave, R and LaTeX using Eclipse on Windows

This post provides a brief introduction to make and makefiles. In particular it describes how to set up make on Windows with an emphasis on using make in Eclipse on projects involving R, Sweave, and LaTeX. Overview make is software… Continue Reading →

Getting Started with Writing Mathematics in LaTeX

LaTeX and mathematics go well together. At the risk of preaching to the converted, this post sets out (a) reasons to learn to write mathematics in LaTeX, (b) a few free internet guides on learning to write mathematics in LaTeX,… Continue Reading →

Getting Started with Beamer: Tips and Tricks for LaTeX Presentations

This post provides a guide to getting started with Beamer, a popular LaTeX package for preparing slide presentations. The post: (a) Lists some of the benefits of Beamer in comparison to PowerPoint; (b) Links to tutorials and suggestions for learning… Continue Reading →

Simple Beamer Template for Getting Started and Reducing Typing

For those who don’t already know, Beamer is a useful package in LaTeX for preparing slide presentations. I have a Beamer template of preamble and slide templates. I found having a template was useful: (a) when first learning Beamer commands,… Continue Reading →

WinEdt 6.0 for LaTeX: Features, Configuration, and Resources

This post discusses my experience with WinEdt 6.0 as a text editor for writing documents in LaTeX. In this post I outline: (a) Why I have chosen to use WinEdt; (b) The role of WinEdt in my workflow; (c) Various… Continue Reading →

Exporting PDFs from JabRef using a Batch File

If you do research, JabRef is a great tool for managing a personal repository of PDFs. JabRef allows you to link your citations with full text PDFs. This post discusses one way of exporting a subset of your PDF repository… Continue Reading →

TeXnicCenter Customisations

Over the last few weeks I’ve been exploring text editors for writing LaTeX documents. I wrote these notes when I was using TeXnicCenter (version 1.0). I have since switched to using WinEdt for writing LaTeX documents. If you do any… Continue Reading →

APA Style References in LaTeX

This post discusses my experience getting APA style references in LaTeX. This includes both in-text citations and the end of document references list. It focuses on the use of the apacite package. Setting up a BibTeX Bibliographic Database Regardless of… Continue Reading →

Converting a Microsoft Word Document into a LaTeX Document

This post discusses my experience converting a large MS Word document into a LaTeX document using Word-to-LaTeX. Along the way I encountered several challenges. I thought I’d document them in case it may be of interest to others. Overview of… Continue Reading →

Export from Endnote to BibTeX, JabRef, and LaTeX

This post sets out a procedure that I used to migrate a large set of Endnote references in a Word Document to a Latex document with BibTeX references in JabRef. In particular, it sets out (1) how to export an… Continue Reading →

Choosing an Auto Generation Pattern for BibTeX Keys in JabRef

This post discusses the issue of choosing a default pattern for the BibTex key generator in JabRef. THE CONTEXT If you haven’t already heard, JabRef is an open source reference manager built on Java, and BibTeX is a file format for storing references. I’ve… Continue Reading →

Getting Started with Sweave: R, LaTeX, Eclipse, StatET, & TeXlipse

Being able to press a single button that runs all your statistical analyses and integrates the output into your final report is a beautiful thing. If you have not already heard, this is what Sweave can do for you. However,… Continue Reading →

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